454 whole genome shotgun sequencing of genomic DNA library '454-1784'... - SRA

SRX004036: 454 whole genome shotgun sequencing of genomic DNA library '454-1784' containing sample 'Acidaminococcus sp. D21'
1 LS454 (454 GS FLX) run: 1,962 spots, 579,846 bases, 1.2Mb downloads

UUID: 7e6a1b14-9fb4-4c98-9da4-13f5dad228c1

Design: 15X fragment; 30X physical paired

Submitted by: Broad Institute (BI)

Study: Reference genome for the Human Microbiome Project

PRJNA34117 • SRP001647 • All experiments • All runs

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<b><i>Acidaminococcus</i> sp. D21</b>. This strain was isolated from the human gastrointestinal tract. It will be sequenced for comparative genome analysis.

Sample: Generic sample from Acidaminococcus sp. D21

SAMN00102964 • SRS002798 • All experiments • All runs

Organism: Acidaminococcus intestini

Library:

Name: 454-1784

Instrument: 454 GS FLX

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Spot descriptor:

barcode

Group tag	Basecalls
Valletta	TCCAGAAC

13 forward

Experiment attributes: (show all 5 attributes...) (hide...)

gssr_id: 16654.1

lsid: BROAD:SEQUENCING_SAMPLE:16654.1

material_type: Genomic DNA

project: G1745

work_request: 17621

Pipeline: show...hide...

Name	Step	Program	Version
base caller	2009-03-19 11:25:28.0	454BaseCaller	2.0.00.17

Runs: 1 run, 1,962 spots, 579,846 bases, 1.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR137204	1,962	579,846	1.2Mb	2011-03-25

ID:: 4292

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